Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015834901.1_cds_XP_016505751.1_19051
CDS Infomation

[gene=LOC107823578] [db_xref=GeneID:107823578] [protein=probable carotenoid cleavage dioxygenase 4, chloroplastic] [protein_id=XP_016505751.1] [location=complement(join(220327..220681,222325..223775))] [gbkey=CDS]
Sequence

ATGGATGCCTTCTCTTCCACTTTCCTTTCTACATTATCACAACACCCTAAATCTCTTCTT
TCTCCTAATTATTCTCCCAACACATCATCTTCTCCTATTCTTAAGGTCTCCTCCGTTAGA
ATTGAAGAAAGGCCACAAACAACTACAACCACTACTAGAACCAAACCACAAGAAAAGCCA
ACCCCATCACCCTACACTCCTCCAAAAGACACTCCCAAAAGACAATTACCTACAAAATCA
ATAACCACAAAAAAACCAGTAGAGCCATCGTTTCCATCAGTTATCTTCAATGCATTTGAC
GATTTCGTGAACACTTTCATTGATCCTCCTTTGAAACCTTGTGTCGATCCAAAGTATATT
CTCTCTAACAACTTTGCTCCGGTGGATGAGCTTCCCCCCACTGAATGCGAGGTCGTGGTA
GGCTCCCTTCCTCCTTGCCTTGACGGCGCGTACATCCGAAATGGCCCCAATCCTCAGTAT
CTTCCACGTGGACCTTACCATCTTTTTGATGGAGATGGAATGCTTCATTCCATTAAAATT
TCTCAAAGCAAAGCTACACTCTGCAGCCGATACGTCAAAACTTACAAATACACAATTGAA
CGTGAAGCTGGTTCTCCGGTTTTCCCAAATGTATTCTCCGGTTTCAACGGTCTCACTGCC
TCGGCGGCGCGTGGTGCTATCACCGCGGCTCGAGCGATTGCGGGACAGTTCAATCCCACT
AACGGCATAGGGCTAGCAAACACAAGCTTGGCTTTATTCGGAGGCAAACTATTCGCTCTT
GGTGAATCTGATTTACCGTATGCAGTAAAATTAGCCCCAGATGGTGATATTATTACCCTC
GGCCGTTACGATTTCGACGGAAAACTTTTCATGAGCATGACGGCACATCCCAAAATTGAC
CCAGATACTAACGAGGCTTTTGCTTTCCGTTACGGTCCAATGCCTCCTTTTTTAACTTAC
TTTAGAATCGAACCAAATGGTACAAAAACACCAGACGTGCCAATATTTTCTATGACACGT
CCGTCATTTCTTCATGACTTTGCAATTACAAATAAATTTGCGATATTCTCGGACATACAA
ATAGGAATGAACCCACTTGAGTTCATCACCGGTGGTTCACCGGTGAGTTCAGACTCGGGG
AAAATCCCTCGCCTTGGCGTGATTCCACGTTACGCCAAGAACGAATCGGAAATGAAGTGG
TTTGATGTGCCCGGGATCAATATTGTACATGCGATTAATGCGTGGGATGAAGATGATGGT
GATACTATAGTGATGGTAGCGCCTAATATATTGTCGGTGGAGCATACGCTGGAGAGAATG
GATATGATACATGCTTCTGTTGAGAAAGTGAAGATAGATTTGAAGAGTGGGATGGTGAGC
AGACAACCATTGTCGACAAGAAATCTTGATTTTGGAGTCATCAATCCGGCTTATGTTGGG
AAGAAGAACAAGTATGTATATGCAGCGATTGGAGACCCTATGCCAAAGATAGCAGGCATA
GCAAAATTGGACGTATCAGTAGCAGAAGCTGATCGGCGCGATTGCATAGTGGCGTGCCGA
TTATTTGGAGAAGGCTGCTTTGGCGGTGAGCCATATTTTGTGGCAAACAATTCAGCAGCG
GATGAGGACGATGGCTACGTTGTGTCGTTTGTGCACAATGAGAAGACAGGAGAGTCAAGG
TTCTTGGTCATGGATGCAAAGTCCCCTAATCTTGACATTGTGGCTGCTGTCAAATTGCCT
CGTCGAGTGCCTTACGGTTTCCACGGCCTTTTCGTTAGGGAAACTGATCTTAGGAAACTC
ATGTAG

Peptide Sequence

PEP ID

XP_016505751.1
PEP Infomation

PREDICTED: probable carotenoid cleavage dioxygenase 4, chloroplastic [Nicotiana tabacum]
Sequence

MDAFSSTFLSTLSQHPKSLLSPNYSPNTSSSPILKVSSVRIEERPQTTTTTTRTKPQEKP
TPSPYTPPKDTPKRQLPTKSITTKKPVEPSFPSVIFNAFDDFVNTFIDPPLKPCVDPKYI
LSNNFAPVDELPPTECEVVVGSLPPCLDGAYIRNGPNPQYLPRGPYHLFDGDGMLHSIKI
SQSKATLCSRYVKTYKYTIEREAGSPVFPNVFSGFNGLTASAARGAITAARAIAGQFNPT
NGIGLANTSLALFGGKLFALGESDLPYAVKLAPDGDIITLGRYDFDGKLFMSMTAHPKID
PDTNEAFAFRYGPMPPFLTYFRIEPNGTKTPDVPIFSMTRPSFLHDFAITNKFAIFSDIQ
IGMNPLEFITGGSPVSSDSGKIPRLGVIPRYAKNESEMKWFDVPGINIVHAINAWDEDDG
DTIVMVAPNILSVEHTLERMDMIHASVEKVKIDLKSGMVSRQPLSTRNLDFGVINPAYVG
KKNKYVYAAIGDPMPKIAGIAKLDVSVAEADRRDCIVACRLFGEGCFGGEPYFVANNSAA
DEDDGYVVSFVHNEKTGESRFLVMDAKSPNLDIVAAVKLPRRVPYGFHGLFVRETDLRKL
M

Transcript Sequence

Gene sequence data has not been registered.